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High Capacity Molecular Storage Technology Developed by KAIST Professor Omar M. Yaghi
KAIST research team has succeeded in developing the technology that allows high capacity protein storage. Professor Omar M. Yaghi (Graduate School of EEWS) and his research team succeeded in developing the core technology that enables the storage of various types of proteins by developing a metal organic structure. The result of their research was published in the May edition of Science magazine. The newly developed technology can store various types and sizes of proteins. This property is expected to pave way to: 1) development of high capacity, high integration drugs 2) development of virus separation compounds 3) selective removal of protein causing negative reactions in the body 4) permanent preservation of rare polymeric proteins, among other expectations. In addition it becomes possible to selectively remove and preserve all the body’s cells including stem cells which will aid the development of cures for incurable diseases and increase life expectancy and medical technology in general. Conventional metal-organic structure used 7 Angstrom large small single molecules and therefore could not be used in the storage of large molecules or proteins. Its usability was proven only as potential high capacity gas storage structure. In addition the internal structure of the metal organic structure is cross linked which made it even more difficult to store large proteins within the structure. Professor Yaghi’s team used molecular structure over 5nm in length in the development of the metal-organic structure to solve the problem associated with size of structure. The ordered structure of the structure’s pore was observed for the first time using Transmission Electron Microscope. The new structure enables the ordered storage of large proteins and was able to store vitamin and proteins like myoglobin at high capacity for the first time in the world.
2012.05.30
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Successful Development of Excavation System of Biomarkers containing Protein Decomposition Control Enzyme Information
A Korean team of researchers successfully developed a biomarker excavation system named E3Net that excavates biomarkers containing information of the enzymes that control the decomposition of proteins. The development of the system paved the possibility of development of new high quality biomarkers. *Biomarker: Molecular information of unique patterns derived from genes and proteins that allow the monitoring of physical changes from genetic or environmental causes. Professor Lee Kwan Soo’s team (Department of Biological Sciences) composed of Doctorate candidate Han Young Woong, Lee Ho Dong Ph.D. and Professor Park Jong Chul published a dissertation in the April edition of Molecular and Cellular Proteomics. (Dissertation Title: A system for exploring E3-mediated regulatory networks of cellular functions). Professor Lee’s team compiled all available information of the enzyme that controls protein decomposition (E3 enzyme) and successfully compiled the inter-substrate network by extracting information from 20,000 biology related data base dissertations. The result was the development of the E3Net system that analyzes the related cell function and disease. Cells have a system that produces, destroys, and recycles proteins in response to the ever changing environmental conditions. Error in these processes leads to disease. Therefore finding the relationship between E3 enzymes that control the decomposition of proteins and the substrates will allow disease curing and prevention to become much easier. E3 enzyme is responsible for 80% of the protein decomposition and is therefore predicted to be related to various diseases. However the information on E3 enzyme and inter-substrate behavior are spread out among numerous dissertations and data bases which prevented methodological analysis of the role of the related cells and characteristics of the disease itself. Professor Lee’s team was successful in creating the E3Net that compiled 2,201 pieces of E3 substrate information, 4,896 pieces of substrate information, and 1,671 pieces of inter-substrate relationship information. This compilation allows for the systematic analysis of cells and diseases. The newly created network is 10 times larger than the existing network and is the first case where it is possible to accurately find the cell function and related diseases. It is anticipated that the use of the E3Net will allow the excavation of new biomarkers for the development of personalized drug systems. The research team applied the E3Net to find tens of new candidate biomarkers related to the major modern diseases like diabetes and cancer.
2012.05.30
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Production of chemicals without petroleum
Systems metabolic engineering of microorganisms allows efficient production of natural and non-natural chemicals from renewable non-food biomass In our everyday life, we use gasoline, diesel, plastics, rubbers, and numerous chemicals that are derived from fossil oil through petrochemical refinery processes. However, this is not sustainable due to the limited nature of fossil resources. Furthermore, our world is facing problems associated with climate change and other environmental problems due to the increasing use of fossil resources. One solution to address above problems is the use of renewable non-food biomass for the production of chemicals, fuels and materials through biorefineries. Microorganisms are used as biocatalysts for converting biomass to the products of interest. However, when microorganisms are isolated from nature, their efficiencies of producing our desired chemicals and materials are rather low. Metabolic engineering is thus performed to improve cellular characteristics to desired levels. Over the last decade, much advances have been made in systems biology that allows system-wide characterization of cellular networks, both qualitatively and quantitatively, followed by whole-cell level engineering based on these findings. Furthermore, rapid advances in synthetic biology allow design and synthesis of fine controlled metabolic and gene regulatory circuits. The strategies and methods of systems biology and synthetic biology are rapidly integrated with metabolic engineering, thus resulting in "systems metabolic engineering". In the paper published online in Nature Chemical Biology on May 17, Professor Sang Yup Lee and his colleagues at the Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Korea present new general strategies of systems metabolic engineering for developing microorganisms for the production of natural and non-natural chemicals from renewable biomass. They first classified the chemicals to be produced into four categories based on whether they have thus far been identified to exist in nature (natural vs. nonnatural) and whether they can be produced by inherent pathways of microorganisms (inherent, noninherent, or created): natural-inherent, natural-noninherent, non-natural-noninherent, and non-natural-created ones. General strategies for systems metabolic engineering of microorganisms for the production of these chemicals using various tools and methods based on omics, genome-scale metabolic modeling and simulation, evolutionary engineering, synthetic biology are suggested with relevant examples. For the production of non-natural chemicals, strategies for the construction of synthetic metabolic pathways are also suggested. Having collected diverse tools and methods for systems metabolic engineering, authors also suggest how to use them and their possible limitations. Professor Sang Yup Lee said "It is expected that increasing number of chemicals and materials will be produced through biorefineries. We are now equipped with new strategies for developing microbial strains that can produce our desired products at very high efficiencies, thus allowing cost competitiveness to those produced by petrochemical refineries." Editor of Nature Chemical Biology, Dr. Catherine Goodman, said "It is exciting to see how quickly science is progressing in this field – ideas that used to be science fiction are taking shape in research labs and biorefineries. The article by Professor Lee and his colleagues not only highlights the most advanced techniques and strategies available, but offers critical advice to progress the field as a whole." The works of Professor Lee have been supported by the Advanced Biomass Center and Intelligent Synthetic Biology Center of Global Frontier Program from the Korean Ministry of Education, Science and Technology through National Research Foundation. Contact: Dr. Sang Yup Lee, Distinguished Professor and Dean, KAIST, Daejeon, Korea (leesy@kaist.ac.kr, +82-42-350-3930)
2012.05.23
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KAIST College of Business ranks no.1 in Asia for executive education
KAIST College of Business ranked 28th in the world and 1st in Asia in the UK Financial Times (FT) 2012 Executive Education open ranking, making it the only school in Korea to be included. The FT ranking selects the world’s top 65 business graduate schools based on executive education course design, teaching methods & materials, faculty, new skills & learning, quality of participants, and several other criteria. Last year, the KAIST executive education program ranked 29th in the world and 2nd in Asia. This year, it surpassed China’s CEIBS to rank 1st in Asia and has now been included in the ranking for three consecutive years. Looking at the individual criteria, KAIST ranked highly in course preparation (11th), international location (11th), facilities (12th), and follow-up (5th) and saw increases in aims achieved (31st) and course design (29th). KAIST attributed its success to the differentiation and specialization of education courses based on position, industry, and enterprise. KAIST College of Business operates an integrative course that fuses business management with science & technology, information media, medicine and innovation. The school runs both a chief and junior executive program to cater to different positional needs and provides specialized lectures that consider a company’s industry and size. The ‘international location’ criteria saw a huge leap from 23rd to 11th due to the use of both long term and short term overseas exchange programs. The ‘Global Leader’ course created in 2011 is taught only in English and allows students to study abroad in a partner school in the second semester. The college’s knowhow in the MBA program also achieved recognition with high rankings in new skills & learning (18th) as well as in teaching methods & materials (24th). College of Business President Lee Byung Tae said that the school’s success was achieved through a specialized curriculum that considers the market and explained that the ranking reflects the school’s competitiveness. He also said that KAIST will continue to provide the best educational services appropriate for KAIST’s outstanding reputation. In the overall ranking, Swiss IMD was ranked number 1, followed by the Harvard Business School. In Asia, China’s CEIBS (29th), Singapore’s Aalto University (42nd), and the National University of Singapore Business School (64th) followed suit.
2012.05.17
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KAIST hosts the first Can Satellite (Cansat) competition
Figure: The cansat is sent up into the air using a balloon and then separated at a certain height. The cansat slowly descends and sends terrestrial observation or atmospheric information back to earth. KAIST will host the first ever Cansat Competition Korea, in which students from different age groups can participate in building and testing the performance of their custom satellites. The Satellite Technology Research Center (SaTReC) at KAIST announced that it will take applications for the Cansat Competition Korea until May 25th. A cansat is a can-sized educational satellite that contains the basic elements of a real satellite. It is fired up to a few hundred meters in the air using balloons or small rockets and then separated like a real satellite, collecting data and sending the information back to earth. Cansat competitions are regularly held in the United States or Europe, where they have advanced space development programs, but this is the first time this competition will be held in Korea. The competition caters to different age groups through a cansat experience science camp for elementary and middle school students and a cansat competition for high school and college students. The science camp will be held from August 7th to 9th at KAIST and Sejong City and will include satellite education, visits to space development centers (KAIST Satellite Technology Research Center and the Korea Aerospace Research Institute), hand-on experience with basic cansat kits, and other various programs. The science camp will consist of a maximum of 20 teams comprised of students from fifth to ninth grade. Each team will have an advisory teacher and 3 to 4 students and can apply for the competition at no cost. The cansat competition will test high school and college students on their personally designed and built can satellites along with the creativity of their mission and developmental outcome. The preliminary review will choose a maximum of 15 teams, while the secondary review will select the 5 teams that will make the final competition based on their design presentation. On August 9th, these 5 teams will be evaluated on their technical ability, mission capacity and presentation skills. The winning team will be given the KAIST presidential award along with a trophy and prize money. Doctor Park from KAIST SaTReC explained that countries with advanced space technology actively support cansat competitions to expand the base of the field. He emphasized Korea’s need for regular cansat competitions to actively promote potential space researchers. More information on the competition can be found on the homepage (http://cansat.kaist.ac.kr) or at the KAIST SaTReC (042-350-8613~4)
2012.05.14
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New concept 'mole game' robot developed
A new game robot concept developed by KAIST researchers came in first place at a world-renowned virtual reality exhibition, despite being the first ever entry by a Korean team. Professor Lee Woohun’s team from the Department of Industrial Design at KAIST won the first-place award of ‘Gran Prix du Jury’ at the famous virtual reality exhibition, Laval Virtual 2012, which was held between March 28th and April 1st, with the mole game robot, ‘MoleBot’. MoleBot can be enjoyed in a completely physical environment unlike other virtual reality games and allows interaction between the virtual world and reality. Such imaginative interaction attracted numerous spectators during the exhibition. The MoleBot table consists of approximately 15,000 small cubes, and as the object inside the table moves, the cubes slide as if a mole is inside. By using a joystick, users can enjoy physical interaction with the table and a wide range of games. The MoleBot can also be operated with hand gestures using ‘Kinect’, a motion sensing input device developed by Microsoft, making it possible to enjoy games as if playing with a pet. Professor Lee’s team came up with the project from a simple idea: ‘What if moles lived inside the table?’ The team first created a table that would hold and allow the movement of the cubes, and then placed a plastic mold underneath it with a layer of spandex in between to lessen the friction, allowing smooth and lifelike movement. The mold contains magnets that allow the accurate delivery of mechanical movement. After two years of continued additional research, MoleBot was released to the world. In the acceptance speech, Professor Lee said, ‘It is rare for a design team to win first place in an engineering exhibition’ and that ‘to achieve such a feat, the MoleBot’s technological creativity and artistic completeness became one’. Professor Lee also said that ‘this concept of creating an interactive world on a table could potentially become a new game interface’ and that he would research on applying this MoleBot technology to different fields such as human-computer interaction, architecture, interior, and clothing. Laval Virtual is a world-renowned exhibition that displays cutting edge technologies in the field of virtual reality. This year was the 14th exhibit, and over 10,000 people participated in it. The exhibition gives out 12 awards, one per field, and Professor Lee’s team won the highest award.
2012.05.07
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The output of terahertz waves enhanced by KAIST team
KAIST researchers have greatly improved the output of terahertz waves, the blue ocean of the optics world. This technology is expected to be applied to portable X-ray cameras, small bio-diagnostic systems, and in many other devices. Professor Ki-Hun Jeong"s research team from the Department of Bio and Brain Engineering used optical nano-antenna technology to increase the output of terahertz waves by three times. Terahertz waves are electromagnetic waves with frequencies between 100GHz to 30THz. They are produced when a femtosecond (10^-15 s) pulse laser is shone on a semiconductor substrate with photoconduction antennas, causing a photocurrent pulse of one picosecond (10^-12 s). Their long wavelengths, in comparison to visible light and infrared rays, give terahertz waves a high penetration power with less energy than X-rays, making them less harmful to humans. These qualities allow us to see through objects, just as X-rays do, but because terahertz waves absorb certain frequencies, we can detect hidden explosives or drugs, which was not possible with X-rays. We can even identify fake drugs. Furthermore, using the spectral information, we can analyze a material"s innate qualities without chemical processing, making it possible to identify skin diseases without harming the body. However, the output was not sufficient to be used in biosensors and other applications. Prof. Jeong"s team added optical nano-antennas, made from gold nano-rods, in between the photoconduction antennas and optimized the structure. This resulted in nanoplasmonic resonance in the photoconduction substrate, increasing the degree of integration of the photocurrent pulse and resulting in a three times larger output. Hence, it is not only possible to see through objects more clearly, but it is also possible to analyze components without a biopsy. Professor Jeong explained, "This technology, coupled with the miniaturization of terahertz devices, can be applied to endoscopes to detect early epithelial cancer" and that he will focus on creating and commercializing these biosensor systems. This research was published in the March issue of the international nanotechnology journal ACS Nano and was funded by the Korea Evaluation Institute of Industrial Technology and the National Research Foundation of Korea. Figure: Mimetic diagram of a THz generator with nano-antennas
2012.04.29
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High-resolution Atomic Imaging of Specimens in Liquid Observed by Transmission Electron Microscopes Using Graphene Liquid Cells
Looking into specimens in liquid at the atomic level to understand nanoscale processes so far regarded as impossible to witnessThe Korea Advanced Institute of Science and Technology (KAIST) announced that a research team from the Department of Materials Science and Engineering has developed a technology that enables scientists and engineers to observe processes occurring in liquid media on the smallest possible scale which is less than a nanometer. Professor Jeong Yong Lee and Researcher Jong Min Yuk, in collaboration with Professors Paul Alivisatos’s and Alex Zettl’s groups at the University of California, Berkeley, succeeded in making a graphene liquid cell or capsule, confining an ultra-thin liquid film between layers of graphene, for real-time and in situ imagining of nanoscale processes in fluids with atomic-level resolution by a transmission electron microscope (TEM). Their research was published in the April 6, 2012 issue of Science. (http://www.sciencemag.org/content/336/6077/61.abstract) The graphene liquid cell (GLC) is composed of two sheets of graphene sandwiched to create a sealed chamber where a platinum growth solution is encapsulated in the form of a thin slice. Each graphene layer has a thickness of one carbon atom, the thinnest membrane that has ever been used to fabricate a liquid cell required for TEM. The research team peered inside the GLC to observe the growth and dynamics of platinum nanocrystals in solution as they coalesced into a larger size, during which the graphene membrane with the encapsulated liquid remained intact. The researchers from KAIST and the UC Berkeley identified important features in the ongoing process of the nanocrystals’ coalescence and their expansion through coalescence to form certain shapes by imaging the phenomena with atomic-level resolution. Professor Lee said, “It has now become possible for scientists to observe what is happening in liquids on an atomic level under transmission electron microscopes.” Researcher Yuk, one of the first authors of the paper, explained his research work. “This research will promote other fields of study related to materials in a fluid stage including physical, chemical, and biological phenomena at the atomic level and promises numerous applications in the future. Pending further studies on liquid microscopy, the full application of a graphene-liquid-cell (GLC) TEM to biological samples is yet to be confirmed. Nonetheless, the GLC is the most effective technique developed today to sustain the natural state of fluid samples or species suspended in the liquid for a TEM imaging.” The transmission electron microscope (TEM), first introduced in the 1930s, produces images at a significantly higher resolution than light microscopes, allowing users to examine the smallest level of physical, chemical, and biological phenomena. Observations by TEM with atomic resolution, however, have been limited to solid and/or frozen samples, and thus it has previously been impossible to study the real time fluid dynamics of liquid phases. TEM imaging is performed in a high vacuum chamber in which a thin slice of the imaged sample is situated, and an electron beam passes through the slice to create an image. In this process, a liquid medium, unlike solid or frozen samples, evaporates, making it difficult to observe under TEM. Attempts to produce a liquid capsule have thus far been made with electron-transparent membranes of such materials as silicon nitride or silicon oxide; such liquid capsules are relatively thick (tens to one hundred nanometers), however, resulting in poor electron transmittance with a reduced resolution of only a few nanometers. Silicon nitride is 25 nanometers thick, whereas graphene is only 0.34 nanometers. Graphene, most commonly found in bulk graphite, is the thinnest material made out of carbon atoms. It has unique properties such as mechanical tensile strength, high flexibility, impermeability to small molecules, and high electrical conductivity. Graphene is an excellent material to hold micro- and nanoscopic objects for observation in a transmission electron microscope by minimizing scattering of the electron beam that irradiates a liquid sample while reducing charging and heating effects. ### Figure 1. Schematic illustration of graphene liquid cells. Sandwiched two sheets of graphene encapsulate a platinum growth solution. Figure 2. In-situ TEM observation of nanocrystal growth and shape evolution. TEM images of platinum nanocrystal coalescence and their faceting in the growth solution.
2012.04.23
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International workshop on healthcare technology to be held on campus, April 24, 2012
KAIST and the KTH Royal Institute of Technology (KTH), Sweden, host a joint workshop on healthcare technologies on Tuesday, April 24, at the LG Semicon Hall (N24). Open to the public, the workshop will proceed with presentations and discussions by participants from both institutions. Presentation topics and speakers are as follows: “Applied medical engineering, innovation from clinical problems” by Professor Lars-Åke Brodin, Dean of School of Technology and Health, KTH “ICT in healthcare” by Professor Björn-Erik Erlandsson, School of Technology and Health, KTH “Department of environmental physiology, human research in extreme environments” by Researcher Mikael Grönkvist, School of Technology and Health, KTH “Brain function imaging using high-resolution MRI technology” by Professor Hyun Wook Park, Department of Electrical Engineering, KAIST “Bioinstrumentation for healthcare and physical human robot interactions” by Professor Jung Kim, Division of Mechanical Engineering, KAIST “A portable high-resolution near-infrared spectroscopy system” by Professor Hyeon-Min Bae, Department of Electrical Engineering, KAIST “Lab-on-a-chip technologies for integrative bioengineering” by Professor Je-Kyun Park, Department of Bio and Brain Engineering, KAIST “The cytoskeleton in cancer and regulation by oncogenic signaling” by Professor David M. Helfman, Department of Biological Sciences, KAIST Professor Chang Dong Yoo, Associate Vice President of Office of Special Projects and Institutional Relations at KAIST, who organized the workshop, says “Aging population and health issues are driving the demand for more sophisticated medical devices, procedures, and most importantly, qualified scientists and engineers specialized in health-related fields. This joint workshop will be a great chance to share new ideas and develop joint research between two leading research-oriented universities in two countries.” Partially supported by LG Ericsson in Korea, the workshop is funded largely by the generous donation, made last June by a Swedish couple, to KAIST scholar exchange program. The couple (Rune Jonasson and Kerstin Jonasson) donated 70 million krona (about 11.8 billion Korean won) to KTH last year and requested that some portion of the sum be used for a scholar exchange program with KAIST. The wife of the couple, Kerstin Jonasson, participated in the Korean War as a nurse, and upon her wish for further development in Korea’s science and technology, KAIST and KTH decided to use the donation for research in the field of healthcare and for a post-doc researcher exchange program. KTH is a world-class university of Sweden and has produced numerous researchers for private enterprises, like Ericsson, and venture businesses. Since 1988, KTH offers a top notch program for information technology; the School of Information and Communication Technology is located in the Kista district, a vibrant cluster of information and communications technology industries in Sweden, and has taken on the crucial role of supplying personnel to the Kista Science Park as well as to academic-industrial cooperation. For any inquiries, please contact the International Relations Team at +82-42-350-2441 (email: jungillee@kaist.ac.kr).
2012.04.21
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KAIST signs strategic partnership with Global Techlink
On April 5th, KAIST signed an official strategic partnership with Global Techlink (GTL), an IP total service company that specializes in international patents and the technology trade, regarding the commercialization of technology (Tech-biz) at KAIST’s Munji Campus. Through this partnership, KAIST hopes to systematically manage not only patents and related technologies developed by the KAIST faculty, but also industrial developments based on business models. Until now, KAIST has concentrated on using its own human resources to transfer its patents and technologies to domestic companies. However, this agreement with GTL allows KAIST to target overseas tech-biz markets. GTL has agreed to help create, protect and strengthen patent rights stemming from KAIST’s research projects and ideas, as well as provide a unified management service extending from selling and licensing patents to venture incubation. KAIST’s vice-president of research, Professor Paik Kyung-Wook said that “We should protect patents developed by talented students and use them in the market to generate profit, but the fact of the matter is that universities do not have the necessary man power or know-how to do so”. He emphasized that this partnership with GTL will accelerate the global commercialization of technological assets developed by KAIST professors, students and researchers. Mr. Kim Jong-hyun, the president of Global Techlink, announced that GTL will provide KAIST’s outstanding intellectual property with a customized total consulting service based on the world’s largest and best technology database, which it monopolizes, and various other services. Also, using its network with global corporations and distributors, the veteran marketing specialists at GTL will support and carry out KAIST’s tech-biz, although the specifics are still being worked out.
2012.04.19
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Attosecond pulses measure ultrafast photoionization processes by Laser Focus World, April 12, 2012
Laser Focus World, a monthly magazine published since 1965 that covers news and business developments on laser, photonics, and optoelectronics technologies, applications, and markets, released a news article on the recent research result by Professor Chang-Hee Nam from the Department of Physics. For the article, please follow the link below: http://www.laserfocusworld.com/articles/2012/04/kaist-attosecond
2012.04.13
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Undergraduate Research Program, Putting Wings on Undergraduate"s Dreams
KAIST held the 2011 URP Research Result Presentation in the Creative Learning Center on the 17th. Four students Jae Gyung Seo, Tran An Tu, Gun Sik Ahn, and Gyung Ryul Bong have been chosen as the grand prize winners. The grand prize winners receive 3.5million won to allow them to participate in an international academic conference. The URP program is the first of its kind in Korea and has been benchmarked from MIT’s UROP(Undergraduate Research Opportunity Program). The school selects 60 individual and 20 team research projects for undergraduates twice a year and provides mentorship as well as financial support. Students signing up for the URP are to submit research plans and are then chosen through looking at these documents. Students receive 6 months of research funds and are to work under a professor and TA in groups of 2 to 3 or individually. The URP program which is funded by the Ministry of Science and Technology has settled in successfully and has been expanded to the entire country. The head of the R&D team, Yong Jae Sung, stated, “The number of research plans have been 154 in 2008, 189 in 2009, 220 and 251 respectively in 2010 and 2011. It’s continuously rising. And over 80% of responses on satisfaction surveys have replied that students were satisfied. It is very popular among undergraduates.“ Student Sang Yeon Cho has also said, “I was able to research on everything that I wanted under funding of the school and the guidance of renowned professors thanks to the URP program.” To Seul Gi Lee, a graduate student for the electrical engineering department who has developed the wearable sleeping pattern analysis system, URP is an especially special program. She said, “I successfully researched in the wearable health care field as my URP research material in 2006 when I was in my junior year. I made second place. After this, I have continued my research in this field on SoC(System on Chip) for wearable healthcare in graduate school and will be receiving my doctorate degree on the 24h.” Doctor Seul Gi Lee has been recognized in the field of wearable healthcare for her research and has been hired as a researcher in the Holst Centre which is a national research center funded by the Netherlands’ government. She will continue to research on measuring and analyzing biological readings.
2012.04.04
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